ETH - Theoretical Biology - Publications Roger Kouyos

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Publications Roger Kouyos

2010

Kouyos, RD, Gordon, SN, Staprans, SI, Silvestri, G, Regoes, RR
Similar impact of CD8+ T cell responses on early virus dynamics during SIV infections of rhesus macaques and sooty mangabeys.
PLOS COMPUTATIONAL BIOLOGY (2010) In Press:-
Abstract

Alizon, S, von Wyl, V, Stadler, T, Kouyos, RD, Yerly, S, Hirschel, B, Boni,J, Shah, C, Klimkait, T, Furrer, H , Rauch, A, Vernazza, P , Bernasconi, E, Battegay, M , Burgisser, P , Telenti, A , Gunthard, HF, Bonhoeffer S
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load
PLOS Pathogens (2010) In Press:-
Abstract

Kouyos, RD, von Wyl, V, Yerly, S, Boni, J, Taffe, P, Shah, C, Burgisser, P, Klimkait, T, Weber, R, Hirschel, B, Cavassini, M, Furrer, H, Battegay, M, Vernazza, PL, Bernasconi, E, Rickenbach, M, Ledergerber, B, Bonhoeffer, S, Gunthard, HF, Swiss HIV Cohort Study
Molecular Epidemiology Reveals Long-Term Changes in HIV Type 1 Subtype B Transmission in Switzerland
JOURNAL OF INFECTIOUS DISEASES (2010) 201:1488-1497
Abstract

Althaus, CF, Gianellaa, S, Rieder, P, von Wyl, V, Kouyos, RD, Niederost, B, Schmid, A, Metzner, KJ, Joos, B, Gunthard, HF, Fischer, M
Rational design of HIV-1 fluorescent hydrolysis probes considering phylogenetic variation and probe performance
JOURNAL OF VIROLOGICAL METHODS (2010) 165:151-160
Abstract

Mostowy, R, Salathe, M, Kouyos, RD, Bonhoeffer, S
ON THE EVOLUTION OF SEXUAL REPRODUCTION IN HOSTS COEVOLVING WITH MULTIPLE PARASITES
EVOLUTION (2010) 64:1644-1656
Abstract

2009

Kouyos, RD, Salathe, M, Otto, SP, Bonhoeffer, S
The role of epistasis on the evolution of recombination in host-parasite coevolution
THEORETICAL POPULATION BIOLOGY (2009) 75:1-13
Abstract Request reprint

Kouyos, RD, Fouchet, M, Bonhoeffer, S
Recombination and drug resistance in HIV: Population dynamics and stochasticity
EPIDEMICS (2009) 1:58-69
Abstract Request reprint

Salathe, M, Kouyos, RD, Bonhoeffer, S
On the Causes of Selection for Recombination Underlying the Red Queen Hypothesis
AMERICAN NATURALIST (2009) 174:S31-S42
Abstract Request reprint

Misevic, D, Kouyos, RD, Bonhoeffer, S
Predicting the Evolution of Sex on Complex Fitness Landscapes
PLOS COMPUTATIONAL BIOLOGY (2009) 5:-
Abstract Request reprint

2008

Salathe, M, Kouyos, RD, Regoes, RR, Bonhoeffer, S
Rapid parasite adaptation drives selection for high recombination rates
EVOLUTION (2008) 62:295-300
Abstract Request reprint

Salathe, M, Kouyos, RD, Bonhoeffer, S
The state of affairs in the kingdom of the Red Queen
TRENDS IN ECOLOGY & EVOLUTION (2008) 23:439-445
Abstract Request reprint

2007

Kouyos, RD, Silander, OK, Bonhoeffer, S
Epistasis between deleterious mutations and the evolution of recombination
TRENDS IN ECOLOGY & EVOLUTION (2007) 22:308-315
Abstract Request reprint

Kouyos, RD, Salathe, M, Bonhoeffer, S
The Red Queen and the persistence of linkage-disequilibrium oscillations in finite and infinite populations
BMC EVOLUTIONARY BIOLOGY (2007) 7:-
Abstract Request reprint

2006

Kouyos, RD, Althaus, CL, Bonhoeffer, S
Stochastic or deterministic: what is the effective population size of HIV-1?
TRENDS IN MICROBIOLOGY (2006) 14:507-511
Abstract Request reprint

Kouyos, RD, Otto, SP, Bonhoeffer, S
Effect of varying epistasis on the evolution of recombination
GENETICS (2006) 173:589-597
Abstract Request reprint

Pierobon, P, Mobilia, M, Kouyos, R, Frey, E
Bottleneck-induced transitions in a minimal model for intracellular transport
PHYSICAL REVIEW E (2006) 74:-
Abstract

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